Deploying YDB cluster manually

This document describes how to deploy a multi-tenant YDB cluster on multiple bare-metal or virtual servers.

Getting started

Prerequisites

Review the system requirements and the cluster topology.

Make sure you have SSH access to all servers. This is required to install artifacts and run the YDB executable.

The network configuration must allow TCP connections on the following ports (these are defaults, but you can change them by settings):

• 22: SSH service
• 2135, 2136: GRPC for client-cluster interaction.
• 19001, 19002: Interconnect for intra-cluster node interaction
• 8765, 8766: HTTP interface of YDB Embedded UI.

Distinct ports are necessary for gRPC, Interconnect and HTTP interface of each dynamic node when hosting multiple dynamic nodes on a single server.

Make sure that the system clocks running on all the cluster's servers are synced by ntpd or chrony. We recommend using the same time source for all servers in the cluster to maintain consistent leap seconds processing.

If the Linux flavor run on the cluster servers uses syslogd for logging, set up log file rotation usinglogrotate or similar tools. YDB services can generate substantial amounts of system logs, particularly when you elevate the logging level for diagnostic purposes. That's why it's important to enable system log file rotation to prevent the /var file system overflow.

Select the servers and disks to be used for storing data:

• Use the block-4-2 fault tolerance model for cluster deployment in one availability zone (AZ). Use at least eight servers to safely survive the loss of two servers.
• Use the mirror-3-dc fault tolerance model for cluster deployment in three availability zones (AZ). To survive the loss of one AZ and one server in another AZ, use at least nine servers. Make sure that the number of servers running in each AZ is the same.

For more information about hardware requirements, see YDB system requirements and recommendations.

Preparing TLS keys and certificates

The TLS protocol provides traffic protection and authentication for YDB server nodes. Before you install your cluster, determine which servers it will host, establish the node naming convention, come up with node names, and prepare your TLS keys and certificates.

You can use existing certificates or generate new ones. Prepare the following files with TLS keys and certificates in the PEM format:

• ca.crt: CA-issued certificate used to sign the other TLS certificates (these files are the same on all the cluster nodes).
• node.key: Secret TLS keys for each cluster node (one key per cluster server).
• node.crt: TLS certificates for each cluster node (each certificate corresponds to a key).
• web.pem: Concatenation of the node secret key, node certificate, and the CA certificate needed for the monitoring HTTP interface (a separate file is used for each server in the cluster).

Your organization should define the parameters required for certificate generation in its policy. The following parameters are commonly used for generating certificates and keys for YDB:

• 2048-bit or 4096-bit RSA keys
• Certificate signing algorithm: SHA-256 with RSA encryption
• Validity period of node certificates: at least 1 year
• CA certificate validity period: at least 3 years.

Make sure that the CA certificate is appropriately labeled, with the CA property enabled along with the "Digital Signature, Non Repudiation, Key Encipherment, Certificate Sign" usage types.

For node certificates, it's key that the actual host name (or names) match the values in the "Subject Alternative Name" field. Enable both the regular usage types ("Digital Signature, Key Encipherment") and advanced usage types ("TLS Web Server Authentication, TLS Web Client Authentication") for the certificates. Node certificates must support both server authentication and client authentication (the extendedKeyUsage = serverAuth,clientAuth option in the OpenSSL settings).

For batch generation or update of YDB cluster certificates by OpenSSL, you can use the sample script from the YDB GitHub repository. Using the script, you can streamline preparation for installation, automatically generating all the key files and certificate files for all your cluster nodes in a single step.

Create a system user and a group to run YDB

On each server that will be running YDB, execute the command below:

sudo groupadd ydb
sudo useradd ydb -g ydb

To ensure that YDB can access block disks, add the user that will run YDB processes, to the disk group:

sudo usermod -aG disk ydb

Install YDB software on each server

1. Download and unpack an archive with the ydbd executable and the libraries required for YDB to run:

mkdir ydbd-stable-linux-amd64
curl -L https://binaries.ydb.tech/ydbd-stable-linux-amd64.tar.gz | tar -xz --strip-component=1 -C ydbd-stable-linux-amd64

1. Create directories for YDB software:

sudo mkdir -p /opt/ydb /opt/ydb/cfg

1. Copy the executable and libraries to the appropriate directories:

sudo cp -iR ydbd-stable-linux-amd64/bin /opt/ydb/
sudo cp -iR ydbd-stable-linux-amd64/lib /opt/ydb/

1. Set the owner of files and folders:

sudo chown -R root:bin /opt/ydb

Prepare and clear disks on each server

For YDB to work efficiently, we recommend using physical (not virtual) disks larger than 800 GB as block devices.

The minimum disk size is 80 GB, otherwise the YDB node won't be able to use the device. Correct and uninterrupted operation with minimum-size disks is not guaranteed. We recommend using such disks exclusively for informational purposes.

1. Create partitions on the selected disks:

DISK=/dev/nvme0n1
sudo parted ${DISK} mklabel gpt -s
sudo parted -a optimal ${DISK} mkpart primary 0% 100%
sudo parted ${DISK} name 1 ydb_disk_ssd_01
sudo partx --u ${DISK}

As a result, a disk labeled /dev/disk/by-partlabel/ydb_disk_ssd_01 will appear on the system.

If you plan to use more than one disk on each server, replace ydb_disk_ssd_01 with a unique label for each one. Disk labels should be unique within each server. They are used in configuration files, see the following guides.

To streamline the next setup step, it makes sense to use the same disk labels on cluster servers having the same disk configuration.

2. Clear the disk by this command built-in the ydbd executable:

sudo LD_LIBRARY_PATH=/opt/ydb/lib /opt/ydb/bin/ydbd admin bs disk obliterate /dev/disk/by-partlabel/ydb_disk_ssd_01

Perform this operation for each disk to be used for YDB data storage.

Prepare configuration files

Prepare a configuration file for YDB:

1. Download a sample config for the appropriate failure model of your cluster:

   • block-4-2: For a single-data center cluster.
   • mirror-3dc: For a cross-data center cluster consisting of 9 nodes.
   • mirror-3dc-3nodes: For a cross-data center cluster consisting of 3 nodes.

2. In the host_configs section, specify all disks and their types on each cluster node. Possible disk types:

   • ROT: Rotational, HDD.
   • SSD: SSD or NVMe.

   host_configs:
   - drive:
     - path: /dev/disk/by-partlabel/ydb_disk_ssd_01
       type: SSD
     host_config_id: 1
   

3. In the hosts section, specify the FQDN of each node, their configuration and location in a data_center or rack:

   hosts:
   - host: node1.ydb.tech
     host_config_id: 1
     walle_location:
       body: 1
       data_center: 'zone-a'
       rack: '1'
   - host: node2.ydb.tech
     host_config_id: 1
     walle_location:
       body: 2
       data_center: 'zone-b'
       rack: '1'
   - host: node3.ydb.tech
     host_config_id: 1
     walle_location:
       body: 3
       data_center: 'zone-c'
       rack: '1'
   

4. Under blob_storage_config, edit the FQDNs of all the nodes accommodating your static storage group:

   • For the mirror-3-dc scheme, specify FQDNs for nine nodes.
   • For the block-4-2 scheme, specify FQDNs for eight nodes.

5. Enable user authentication (optional).

   If you plan to use authentication and user access differentiation features in the YDB cluster, add the following parameters to the domains_config section:

   domains_config:
     security_config:
       enforce_user_token_requirement: true
       monitoring_allowed_sids:
       - "root"
       - "ADMINS"
       - "DATABASE-ADMINS"
       administration_allowed_sids:
       - "root"
       - "ADMINS"
       - "DATABASE-ADMINS"
       viewer_allowed_sids:
       - "root"
       - "ADMINS"
       - "DATABASE-ADMINS"
   

In the traffic encryption mode, make sure that the YDB configuration file specifies paths to key files and certificate files under interconnect_config and grpc_config:

interconnect_config:
   start_tcp: true
   encryption_mode: OPTIONAL
   path_to_certificate_file: "/opt/ydb/certs/node.crt"
   path_to_private_key_file: "/opt/ydb/certs/node.key"
   path_to_ca_file: "/opt/ydb/certs/ca.crt"
grpc_config:
   cert: "/opt/ydb/certs/node.crt"
   key: "/opt/ydb/certs/node.key"
   ca: "/opt/ydb/certs/ca.crt"
   services_enabled:
   - legacy

Save the YDB configuration file as /opt/ydb/cfg/config.yaml on each cluster node.

For more detailed information about creating the configuration file, see YDB cluster configuration.

Copy the TLS keys and certificates to each server

Make sure to copy the generated TLS keys and certificates to a protected folder on each YDB cluster node. Below are sample commands that create a protected folder and copy files with keys and certificates.

sudo mkdir -p /opt/ydb/certs
sudo cp -v ca.crt /opt/ydb/certs/
sudo cp -v node.crt /opt/ydb/certs/
sudo cp -v node.key /opt/ydb/certs/
sudo cp -v web.pem /opt/ydb/certs/
sudo chown -R ydb:ydb /opt/ydb/certs
sudo chmod 700 /opt/ydb/certs

Start static nodes

sudo su - ydb
cd /opt/ydb
export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd server --log-level 3 --syslog --tcp --yaml-config  /opt/ydb/cfg/config.yaml \
  --grpcs-port 2135 --ic-port 19001 --mon-port 8765 --mon-cert /opt/ydb/certs/web.pem --node static

[Unit]
Description=YDB storage node
After=network-online.target rc-local.service
Wants=network-online.target
StartLimitInterval=10
StartLimitBurst=15

[Service]
Restart=always
RestartSec=1
User=ydb
PermissionsStartOnly=true
StandardOutput=syslog
StandardError=syslog
SyslogIdentifier=ydbd
SyslogFacility=daemon
SyslogLevel=err
Environment=LD_LIBRARY_PATH=/opt/ydb/lib
ExecStart=/opt/ydb/bin/ydbd server --log-level 3 --syslog --tcp \
    --yaml-config  /opt/ydb/cfg/config.yaml \
    --grpcs-port 2135 --ic-port 19001 --mon-port 8765 \
    --mon-cert /opt/ydb/certs/web.pem --node static
LimitNOFILE=65536
LimitCORE=0
LimitMEMLOCK=3221225472

[Install]
WantedBy=multi-user.target

sudo systemctl start ydbd-storage

Initialize a cluster

The cluster initialization operation sets up static nodes listed in the cluster configuration file, for storing YDB data.

To initialize the cluster, you'll need the ca.crt file issued by the Certificate Authority. Use its path in the initialization commands. Before running the commands, copy ca.crt to the server where you will run the commands.

Cluster initialization actions depend on whether the user authentication mode is enabled in the YDB configuration file.

ydb -e grpcs://<node1.ydb.tech>:2135 -d /Root --ca-file ca.crt \
  --user root --no-password auth get-token --force >token-file

export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd -f token-file --ca-file ca.crt -s grpcs://`hostname -f`:2135 \
    admin blobstorage config init --yaml-file  /opt/ydb/cfg/config.yaml
echo $?

export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd --ca-file ca.crt -s grpcs://`hostname -f`:2135 \
    admin blobstorage config init --yaml-file  /opt/ydb/cfg/config.yaml
echo $?

You will see that the cluster was initialized successfully when the cluster initialization command returns a zero code.

Create a database

To work with row-oriented and column-oriented tables, you need to create at least one database and run a process (or processes) to serve this database (dynamic nodes):

To execute the administrative command for database creation, you will need the ca.crt certificate file issued by the Certificate Authority (see the above description of cluster initialization).

When creating your database, you set an initial number of storage groups that determine the available input/output throughput and maximum storage. For an existing database, you can increase the number of storage groups when needed.

The database creation procedure depends on whether you enabled user authentication in the YDB configuration file.

export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd -f token-file --ca-file ca.crt -s grpcs://`hostname -s`:2135 \
    admin database /Root/testdb create ssd:1
echo $?

export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd --ca-file ca.crt -s grpcs://`hostname -s`:2135 \
    admin database /Root/testdb create ssd:1
echo $?

You will see that the database was created successfully when the command returns a zero code.

The command example above uses the following parameters:

• /Root: Name of the root domain, must match the domains_config.domain.name setting in the cluster configuration file.
• testdb: Name of the created database.
• ssd:1: Name of the storage pool and the number of storage groups allocated. The pool name usually means the type of data storage devices and must match the storage_pool_types.kind setting inside the domains_config.domain element of the configuration file.

Run dynamic nodes

sudo su - ydb
cd /opt/ydb
export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd server --grpcs-port 2136 --grpc-ca /opt/ydb/certs/ca.crt \
    --ic-port 19002 --ca /opt/ydb/certs/ca.crt \
    --mon-port 8766 --mon-cert /opt/ydb/certs/web.pem \
    --yaml-config  /opt/ydb/cfg/config.yaml --tenant /Root/testdb \
    --node-broker grpcs://<ydb1>:2135 \
    --node-broker grpcs://<ydb2>:2135 \
    --node-broker grpcs://<ydb3>:2135

[Unit]
Description=YDB testdb dynamic node
After=network-online.target rc-local.service
Wants=network-online.target
StartLimitInterval=10
StartLimitBurst=15

[Service]
Restart=always
RestartSec=1
User=ydb
PermissionsStartOnly=true
StandardOutput=syslog
StandardError=syslog
SyslogIdentifier=ydbd
SyslogFacility=daemon
SyslogLevel=err
Environment=LD_LIBRARY_PATH=/opt/ydb/lib
ExecStart=/opt/ydb/bin/ydbd server \
    --grpcs-port 2136 --grpc-ca /opt/ydb/certs/ca.crt \
    --ic-port 19002 --ca /opt/ydb/certs/ca.crt \
    --mon-port 8766 --mon-cert /opt/ydb/certs/web.pem \
    --yaml-config  /opt/ydb/cfg/config.yaml --tenant /Root/testdb \
    --node-broker grpcs://<ydb1>:2135 \
    --node-broker grpcs://<ydb2>:2135 \
    --node-broker grpcs://<ydb3>:2135
LimitNOFILE=65536
LimitCORE=0
LimitMEMLOCK=32212254720

[Install]
WantedBy=multi-user.target

sudo systemctl start ydbd-testdb

Run additional dynamic nodes on other servers to ensure database scalability and fault tolerance.

Initial account setup

If authentication mode is enabled in the cluster configuration file, initial account setup must be done before working with the YDB cluster.

The initial installation of the YDB cluster automatically creates a root account with a blank password, as well as a standard set of user groups described in the Access management section.

To perform initial account setup in the created YDB cluster, run the following operations:

1. Install the YDB CLI as described in the documentation.

2. Set the password for the root account:

ydb --ca-file ca.crt -e grpcs://<node.ydb.tech>:2136 -d /Root/testdb --user root --no-password \
    yql -s 'ALTER USER root PASSWORD "passw0rd"'

Replace the passw0rd value with the required password.

1. Create additional accounts:

ydb --ca-file ca.crt -e grpcs://<node.ydb.tech>:2136 -d /Root/testdb --user root \
    yql -s 'CREATE USER user1 PASSWORD "passw0rd"'

1. Set the account rights by including them in the integrated groups:

ydb --ca-file ca.crt -e grpcs://<node.ydb.tech>:2136 -d /Root/testdb --user root \
    yql -s 'ALTER GROUP `ADMINS` ADD USER user1'

In the command examples above, <node.ydb.tech> is the FQDN of the server running any dynamic node that serves the /Root/testdb database.

When running the account creation and group assignment commands, the YDB CLI client will request the root user's password. You can avoid multiple password entries by creating a connection profile as described in the YDB CLI documentation.

Start using the created database

1. Install the YDB CLI as described in the documentation.

2. Create a test row (test_row_table) or column (test_column_table) oriented table:

ydb --ca-file ca.crt -e grpcs://<node.ydb.tech>:2136 -d /Root/testdb --user root \
   yql -s 'CREATE TABLE `testdir/test_row_table` (id Uint64, title Utf8, PRIMARY KEY (id));'

ydb --ca-file ca.crt -e grpcs://<node.ydb.tech>:2136 -d /Root/testdb --user root \
   yql -s 'CREATE TABLE `testdir/test_column_table` (id Uint64, title Utf8, PRIMARY KEY (id)) WITH (STORE = COLUMN);'

Here, <node.ydb.tech> is the FQDN of the server running the dynamic node that serves the /Root/testdb database.

Checking access to the built-in web interface

To check access to the YDB built-in web interface, open in the browser the https://<node.ydb.tech>:8765 URL, where <node.ydb.tech> is the FQDN of the server running any static YDB node.

In the web browser, set as trusted the certificate authority that issued certificates for the YDB cluster. Otherwise, you will see a warning about an untrusted certificate.

If authentication is enabled in the cluster, the web browser should prompt you for a login and password. Enter your credentials, and you'll see the built-in interface welcome page. The user interface and its features are described in Using the embedded web UI.

Installing YDB in the unprotected mode

The above installation procedure assumes that YDB was deployed in the standard protected mode.

The unprotected YDB mode is primarily intended for test scenarios associated with YDB software development and testing. In the unprotected mode:

• Traffic between cluster nodes and between applications and the cluster runs over an unencrypted connection.
• Users are not authenticated (it doesn't make sense to enable authentication when the traffic is unencrypted because the login and password in such a configuration would be transparently transmitted across the network).

When installing YDB to run in the unprotected mode, follow the above procedure, with the following exceptions:

1. When preparing for the installation, you do not need to generate TLS certificates and keys and copy the certificates and keys to the cluster nodes.
2. In the configuration files, remove the security_config subsection under domains_config. Remove the interconnect_config and grpc_config sections entirely.
3. Use simplified commands to run static and dynamic cluster nodes: omit the options that specify file names for certificates and keys; use the grpc protocol instead of grpcs when specifying the connection points.
4. Skip the step of obtaining an authentication token before cluster initialization and database creation because it's not needed in the unprotected mode.
5. Cluster initialization command has the following format:

export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd admin blobstorage config init --yaml-file  /opt/ydb/cfg/config.yaml
echo $?

1. Database creation command has the following format:

export LD_LIBRARY_PATH=/opt/ydb/lib
/opt/ydb/bin/ydbd admin database /Root/testdb create ssd:1

1. When accessing your database from the YDB CLI and applications, use grpc instead of grpcs and skip authentication.